EnhancerDB
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  3. rs397861188[chr1:42248402]
Enhancers that have rs397861188[chr1:42248402]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs397861188[chr1:42248402]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42248399 42248414 FOXP1 JASPAR yes 28422030
chr1 42248400 42248415 FOXP1 JASPAR yes 28422031
chr1 42248401 42248416 FOXP1 JASPAR yes 28422032
chr1 42248402 42248417 FOXP1 JASPAR yes 28422033
Genes associated with rs397861188[chr1:42248402], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More