EnhancerDB
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  3. rs397861629[chr1:235572324]
Enhancers that have rs397861629[chr1:235572324]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235558909 235574575 enh12802
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Placenta Lung (PC-9) Pancreas (Panc1)
Transcript factors that have rs397861629[chr1:235572324]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235572318 235572339 IRF1 JASPAR yes 36368140
chr1 235572320 235572341 IRF1 JASPAR yes 36368141
chr1 235572321 235572336 FOXP1 JASPAR yes 36368142
chr1 235572321 235572342 IRF1 JASPAR yes 36368143
chr1 235572322 235572343 IRF1 JASPAR yes 36368144
chr1 235572323 235572338 FOXP1 JASPAR yes 36368145
chr1 235572324 235572339 FOXP1 JASPAR yes 36368146
Genes associated with rs397861629[chr1:235572324], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More