EnhancerDB
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  3. rs397863265[chr1:53856359]
Enhancers that have rs397863265[chr1:53856359]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 53854045 53869017 enh42964
Bone Marrow (K562) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs397863265[chr1:53856359]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 53856342 53856362 RREB1 JASPAR yes 28927485
chr1 53856343 53856364 IRF1 JASPAR yes 28927486
chr1 53856344 53856359 FOXP1 JASPAR yes 28927488
chr1 53856347 53856359 IRF1 JASPAR yes 28927489
chr1 53856347 53856367 RREB1 JASPAR yes 28927490
chr1 53856348 53856369 IRF1 JASPAR yes 28927491
chr1 53856349 53856364 FOXP1 JASPAR yes 28927493
chr1 53856350 53856365 STAT2 JASPAR yes 28927494
chr1 53856352 53856364 IRF1 JASPAR yes 28927495
chr1 53856354 53856360 TCF4 TRANSFAC yes 28927496
chr1 53856354 53856369 FOXP1 JASPAR yes 28927497
chr1 53856355 53856366 FOXP2 JASPAR yes 28927498
chr1 53856355 53856367 FOXC2 JASPAR yes 28927499
Genes associated with rs397863265[chr1:53856359], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More