EnhancerDB
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  3. rs397863826[chr1:28396059]
Enhancers that have rs397863826[chr1:28396059]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28387565 28408035 enh180
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Heart
Transcript factors that have rs397863826[chr1:28396059]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28396050 28396065 MEF2A JASPAR yes 27736723
chr1 28396051 28396066 MEF2C JASPAR yes 27736724
chr1 28396052 28396064 MEF2A JASPAR yes 27736725
chr1 28396053 28396063 MEF2A JASPAR yes 27736726
chr1 28396054 28396069 MEF2C JASPAR yes 27736728
chr1 28396056 28396071 FOXP1 JASPAR yes 27736729
chr1 28396057 28396072 FOXP1 JASPAR yes 27736730
chr1 28396058 28396064 TBP TRANSFAC yes 27736731
chr1 28396058 28396073 FOXP1 JASPAR yes 27736732
chr1 28396058 28396079 IRF1 JASPAR yes 27736733
chr1 28396059 28396074 FOXP1 JASPAR yes 27736734
chr1 28396059 28396080 IRF1 JASPAR yes 27736735
Genes associated with rs397863826[chr1:28396059], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More