EnhancerDB
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  3. rs397878592[chr4:90877630]
Enhancers that have rs397878592[chr4:90877630]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 90874505 90880980 enh71287
Neural Stem Cells (H9)
Transcript factors that have rs397878592[chr4:90877630]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 90877621 90877631 POU6F2 JASPAR yes 91258407
chr4 90877622 90877632 EMX1 JASPAR yes 91258408
chr4 90877622 90877632 EMX2 JASPAR yes 91258409
chr4 90877622 90877632 ESX1 JASPAR yes 91258410
chr4 90877622 90877632 EVX1 JASPAR yes 91258411
chr4 90877622 90877632 EVX2 JASPAR yes 91258412
chr4 90877622 90877632 GBX2 JASPAR yes 91258413
chr4 90877622 90877632 HESX1 JASPAR yes 91258414
chr4 90877622 90877632 HOXA2 JASPAR yes 91258415
chr4 90877622 90877632 HOXB2 JASPAR yes 91258416
chr4 90877622 90877632 HOXB3 JASPAR yes 91258417
chr4 90877622 90877632 LHX2 JASPAR yes 91258418
chr4 90877622 90877632 LHX6 JASPAR yes 91258419
chr4 90877622 90877632 MEOX1 JASPAR yes 91258420
chr4 90877622 90877632 MEOX2 JASPAR yes 91258421
chr4 90877622 90877632 POU6F1 JASPAR yes 91258422
chr4 90877622 90877632 RAX JASPAR yes 91258423
chr4 90877623 90877631 LBX1 JASPAR yes 91258424
chr4 90877623 90877631 PDX1 JASPAR yes 91258425
chr4 90877623 90877631 VAX1 JASPAR yes 91258426
chr4 90877623 90877631 VAX2 JASPAR yes 91258427
chr4 90877623 90877631 VSX1 JASPAR yes 91258428
chr4 90877623 90877631 VSX2 JASPAR yes 91258429
Genes associated with rs397878592[chr4:90877630], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More