EnhancerDB
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  3. rs397964533[chr1:235571193]
Enhancers that have rs397964533[chr1:235571193]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235558909 235574575 enh12802
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Placenta Lung (PC-9) Pancreas (Panc1)
Transcript factors that have rs397964533[chr1:235571193]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235571181 235571202 IRF1 JASPAR yes 36367989
chr1 235571185 235571197 IRF1 JASPAR yes 36367990
chr1 235571185 235571199 IRF7 JASPAR yes 36367991
chr1 235571185 235571200 IRF9 JASPAR yes 36367992
chr1 235571187 235571208 IRF1 JASPAR yes 36367993
chr1 235571189 235571204 STAT2 JASPAR yes 36367994
chr1 235571190 235571204 STAT1 JASPAR yes 36367995
chr1 235571192 235571207 FOXP1 JASPAR yes 36367996
chr1 235571192 235571213 IRF1 JASPAR yes 36367997
chr1 235571193 235571208 FOXP1 JASPAR yes 36367998
Genes associated with rs397964533[chr1:235571193], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More