EnhancerDB
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  3. rs398013116[chr10:29277041]
Enhancers that have rs398013116[chr10:29277041]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 29271248 29288915 enh13085
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Muscle (Myotube) Heart
Transcript factors that have rs398013116[chr10:29277041]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 29275845 29277041 ZNF143 GTRD no Epithelial (MCF-7) 21423894
chr10 29275890 29277095 ZNF143 GTRD no Epithelial (MCF-7) 21423896
chr10 29275924 29277758 ZNF143 GTRD no Epithelial (MCF-7) 21423898
chr10 29276009 29277817 ZNF143 GTRD no Epithelial (MCF-7) 21423899
chr10 29276024 29277909 ZNF143 GTRD no Epithelial (MCF-7) 21423901
chr10 29276139 29277730 ZNF143 GTRD no Epithelial (MCF-7) 21423902
chr10 29276183 29277082 ZNF143 GTRD no Epithelial (MCF-7) 21423905
chr10 29277030 29277043 SMAD2 JASPAR yes 126282211
chr10 29277040 29277052 IRF1 JASPAR yes 126282212
Genes associated with rs398013116[chr10:29277041], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More