EnhancerDB
  1. Home
  2. SNP
  3. rs398049295[chr1:54743999]
Enhancers that have rs398049295[chr1:54743999]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54732705 54747095 enh11864
Bone Marrow (K562) Astrocyte Adrenal Pancreas Uterus Kidney Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs398049295[chr1:54743999]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54743984 54744000 SRF JASPAR yes 28967976
chr1 54743988 54744006 E2F3 JASPAR yes 28967981
chr1 54743993 54744014 IRF1 JASPAR yes 28967982
chr1 54743998 54744013 FOXP1 JASPAR yes 28967983
chr1 54743999 54744014 FOXP1 JASPAR yes 28967984
Genes associated with rs398049295[chr1:54743999], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More