EnhancerDB
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  3. rs398052924[chr1:40479892]
Enhancers that have rs398052924[chr1:40479892]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40476445 40483374 enh11772
Skin (Keratinocyte) Prostate (PC-3) Large Intestine Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Blood (T-cell)
Transcript factors that have rs398052924[chr1:40479892]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40479883 40479893 NOTO JASPAR yes 28309021
chr1 40479885 40479896 PROP1 JASPAR yes 28309022
chr1 40479886 40479907 IRF1 JASPAR yes 28309023
chr1 40479887 40479902 FOXP1 JASPAR yes 28309024
chr1 40479888 40479897 SRY JASPAR yes 28309025
chr1 40479888 40479899 FOXP2 JASPAR yes 28309026
chr1 40479888 40479900 FOXC2 JASPAR yes 28309027
chr1 40479888 40479903 STAT2 JASPAR yes 28309028
chr1 40479889 40479900 FOXC1 JASPAR yes 28309029
chr1 40479889 40479903 STAT1 JASPAR yes 28309030
chr1 40479889 40479904 STAT2 JASPAR yes 28309031
chr1 40479890 40479901 FOXA1 JASPAR yes 28309032
chr1 40479892 40479907 FOXP1 JASPAR yes 28309033
Genes associated with rs398052924[chr1:40479892], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More