EnhancerDB
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  3. rs398053699[chr1:200408026]
Enhancers that have rs398053699[chr1:200408026]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200395745 200424875 enh27417
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Astrocyte Peripheral Blood (MM.1S) Lung (PC-9) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs398053699[chr1:200408026]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200403827 200409116 AR GTRD no Prostate (PC-3) 21363470
chr1 200406760 200409298 ZNF274 GTRD no Cervix (HeLa-S3) 21363481
chr1 200407168 200412701 ZNF143 GTRD no Epithelial (MCF-7) 21363483
chr1 200407396 200408293 ZNF143 GTRD no Epithelial (MCF-7) 21363484
chr1 200407733 200408305 ZNF143 GTRD no Epithelial (MCF-7) 21363487
chr1 200407838 200408294 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21363488
chr1 200408011 200408026 FOXP1 JASPAR yes 34447314
chr1 200408014 200408035 IRF1 JASPAR yes 34447315
chr1 200408015 200408036 IRF1 JASPAR yes 34447316
chr1 200408018 200408032 SPIC JASPAR yes 34447317
chr1 200408019 200408033 SPIC JASPAR yes 34447318
chr1 200408019 200408033 STAT1 JASPAR yes 34447319
chr1 200408019 200408034 PRDM1 JASPAR yes 34447320
chr1 200408019 200408034 STAT2 JASPAR yes 34447321
chr1 200408019 200408040 ZNF263 JASPAR yes 34447322
chr1 200408021 200408042 IRF1 JASPAR yes 34447323
chr1 200408022 200408043 ZNF263 JASPAR yes 34447324
chr1 200408023 200408028 ETS2 TRANSFAC yes 34447325
chr1 200408023 200408044 IRF1 JASPAR yes 34447326
chr1 200408023 200408044 ZNF263 JASPAR yes 34447327
Genes associated with rs398053699[chr1:200408026], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More