EnhancerDB
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  3. rs398089807[chr1:200460511]
Enhancers that have rs398089807[chr1:200460511]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200450387 200461835 enh12512
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Placenta Lung (PC-9) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs398089807[chr1:200460511]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200460287 200460617 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21363682
chr1 200460317 200460637 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21363683
chr1 200460415 200460545 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21363684
chr1 200460511 200460523 FOXC2 JASPAR yes 34455074
Genes associated with rs398089807[chr1:200460511], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More