EnhancerDB
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  3. rs398102590[chr1:24895517]
Enhancers that have rs398102590[chr1:24895517]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24883605 24896815 enh11621
Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Stomach Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs398102590[chr1:24895517]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24895496 24895517 IRF1 JASPAR yes 27511972
chr1 24895500 24895520 RREB1 JASPAR yes 27511975
chr1 24895501 24895522 IRF1 JASPAR yes 27511976
chr1 24895502 24895517 FOXP1 JASPAR yes 27511978
chr1 24895505 24895517 IRF1 JASPAR yes 27511979
chr1 24895505 24895525 RREB1 JASPAR yes 27511980
chr1 24895506 24895527 IRF1 JASPAR yes 27511981
chr1 24895507 24895522 FOXP1 JASPAR yes 27511983
chr1 24895508 24895523 STAT2 JASPAR yes 27511984
chr1 24895510 24895522 IRF1 JASPAR yes 27511985
chr1 24895512 24895518 TCF4 TRANSFAC yes 27511986
chr1 24895512 24895527 FOXP1 JASPAR yes 27511987
chr1 24895513 24895524 FOXP2 JASPAR yes 27511988
chr1 24895513 24895525 FOXC2 JASPAR yes 27511989
Genes associated with rs398102590[chr1:24895517], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More