EnhancerDB
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Enhancers that have rs398103582[chr1:200396322]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200395745 200424875 enh27417
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Astrocyte Peripheral Blood (MM.1S) Lung (PC-9) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs398103582[chr1:200396322]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200396302 200396322 RREB1 JASPAR yes 34445551
chr1 200396305 200396325 RREB1 JASPAR yes 34445553
chr1 200396309 200396324 FOXP1 JASPAR yes 34445555
chr1 200396310 200396330 RREB1 JASPAR yes 34445557
chr1 200396310 200396331 IRF1 JASPAR yes 34445558
chr1 200396311 200396332 IRF1 JASPAR yes 34445559
chr1 200396316 200396337 IRF1 JASPAR yes 34445560
chr1 200396317 200396323 TCF4 TRANSFAC yes 34445561
chr1 200396317 200396332 FOXP1 JASPAR yes 34445562
chr1 200396318 200396329 FOXP2 JASPAR yes 34445563
chr1 200396318 200396330 FOXC2 JASPAR yes 34445564
chr1 200396318 200396333 STAT2 JASPAR yes 34445565
chr1 200396319 200396334 FOXP1 JASPAR yes 34445566
chr1 200396321 200396336 FOXP1 JASPAR yes 34445567
chr1 200396322 200396337 FOXP1 JASPAR yes 34445568
Genes associated with rs398103582[chr1:200396322], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More