EnhancerDB
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  3. rs41421246[chr1:172716579]
Enhancers that have rs41421246[chr1:172716579]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172711957 172718375 enh730
Prostate (PC-3) Large Intestine Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Lung Blood (OCI-LY7) Lung (A549) Stomach Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs41421246[chr1:172716579]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172716560 172716579 RFX2 JASPAR yes 33151101
chr1 172716564 172716580 RFX5 JASPAR yes 33151102
Genes associated with rs41421246[chr1:172716579], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More