EnhancerDB
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  3. rs4143029[chr1:117048330]
Enhancers that have rs4143029[chr1:117048330]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs4143029[chr1:117048330]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117048133 117048426 ZNF274 GTRD no Liver (HepG2) 21333306
chr1 117048320 117048330 HOXC10 JASPAR yes 31815125
chr1 117048320 117048330 HOXD11 JASPAR yes 31815126
chr1 117048320 117048331 HOXC11 JASPAR yes 31815127
chr1 117048321 117048330 CDX1 JASPAR yes 31815128
chr1 117048321 117048332 CDX2 JASPAR yes 31815129
chr1 117048324 117048344 TBX19 JASPAR yes 31815130
chr1 117048325 117048333 MEIS2 JASPAR yes 31815131
chr1 117048325 117048333 MEIS3 JASPAR yes 31815132
chr1 117048326 117048342 T JASPAR yes 31815133
Genes associated with rs4143029[chr1:117048330], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More