EnhancerDB
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  3. rs416365[chr1:25350186]
Enhancers that have rs416365[chr1:25350186]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25342085 25355155 enh148
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Thymus Stomach
Transcript factors that have rs416365[chr1:25350186]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25350180 25350190 TFEB JASPAR yes 27554846
chr1 25350180 25350190 TFEC JASPAR yes 27554847
chr1 25350180 25350191 USF1 JASPAR yes 27554848
chr1 25350180 25350191 USF2 JASPAR yes 27554849
Genes associated with rs416365[chr1:25350186], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More