EnhancerDB
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  3. rs4308006[chr17:54754256]
Enhancers that have rs4308006[chr17:54754256]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 54753045 54762155 enh17235
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Ovary Lung (PC-9) Astrocyte Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas
Transcript factors that have rs4308006[chr17:54754256]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 54754174 54754927 ZNF274 GTRD no Cervix (HeLa-S3) 21772912
chr17 54754221 54754511 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21772913
chr17 54754247 54754256 THAP1 JASPAR yes 54902207
Genes associated with rs4308006[chr17:54754256], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More