EnhancerDB
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  3. rs4344297[chr1:227489409]
Enhancers that have rs4344297[chr1:227489409]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 227484965 227490084 enh27590
Cervix (HeLa-S3) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Muscle (Myoblast) Epithelial (MCF-7)
Transcript factors that have rs4344297[chr1:227489409]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 227489398 227489416 IRF2 JASPAR yes 35867610
chr1 227489399 227489415 SOX8 JASPAR yes 35867611
chr1 227489399 227489420 IRF1 JASPAR yes 35867612
chr1 227489400 227489413 POU2F2 JASPAR yes 35867613
chr1 227489400 227489414 POU1F1 JASPAR yes 35867614
chr1 227489401 227489413 POU3F1 JASPAR yes 35867615
chr1 227489401 227489413 POU3F2 JASPAR yes 35867616
chr1 227489401 227489414 POU3F3 JASPAR yes 35867617
chr1 227489401 227489416 PRDM1 JASPAR yes 35867618
chr1 227489403 227489415 IRF1 JASPAR yes 35867619
chr1 227489403 227489417 IRF7 JASPAR yes 35867620
chr1 227489407 227489421 GATA2 JASPAR yes 35867621
chr1 227489408 227489412 YY1 TRANSFAC yes 35867622
Genes associated with rs4344297[chr1:227489409], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More