EnhancerDB
  1. Home
  2. SNP
  3. rs4596946[chr1:17516813]
Enhancers that have rs4596946[chr1:17516813]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17506285 17522712 enh11554
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus
Transcript factors that have rs4596946[chr1:17516813]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17516798 17516813 NR2C2 JASPAR yes 27076343
chr1 17516807 17516819 TFAP2A JASPAR yes 27076348
chr1 17516807 17516822 TFAP2A JASPAR yes 27076349
chr1 17516808 17516819 TFAP2A JASPAR yes 27076350
chr1 17516808 17516819 TFAP2B JASPAR yes 27076351
chr1 17516808 17516819 TFAP2C JASPAR yes 27076352
chr1 17516813 17516826 SMAD2 JASPAR yes 27076353
Genes associated with rs4596946[chr1:17516813], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More