EnhancerDB
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  3. rs4660558[chr1:42206499]
Enhancers that have rs4660558[chr1:42206499]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42199705 42213143 enh290
Prostate (PC-3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Muscle (Myoblast) Thymus Stomach
Transcript factors that have rs4660558[chr1:42206499]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42205815 42206961 ZNF143 GTRD no Epithelial (MCF-7) 107802974
chr1 42206490 42206509 RFX2 JASPAR yes 28416003
chr1 42206493 42206513 RREB1 JASPAR yes 28416004
Genes associated with rs4660558[chr1:42206499], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More