EnhancerDB
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  3. rs4660571[chr1:42227142]
Enhancers that have rs4660571[chr1:42227142]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs4660571[chr1:42227142]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42227133 42227143 TBX21 JASPAR yes 28418936
chr1 42227133 42227144 TBX20 JASPAR yes 28418937
chr1 42227133 42227144 TBX2 JASPAR yes 28418938
chr1 42227133 42227146 EOMES JASPAR yes 28418939
chr1 42227134 42227142 MGA JASPAR yes 28418940
chr1 42227134 42227142 TBX15 JASPAR yes 28418941
chr1 42227134 42227142 TBX1 JASPAR yes 28418942
chr1 42227134 42227142 TBX4 JASPAR yes 28418943
chr1 42227134 42227142 TBX5 JASPAR yes 28418944
chr1 42227134 42227144 TBR1 JASPAR yes 28418945
Genes associated with rs4660571[chr1:42227142], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More