-
Home
- SNP
- rs4761234[chr12:69732105]
Enhancers that have rs4761234[chr12:69732105]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr12 |
69721625 |
69736035 |
enh2427 |
|
|
| chr12 |
69731953 |
69732266 |
vista13961 |
|
|
Transcript factors that have rs4761234[chr12:69732105]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr12
|
69731874
|
69732490
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
21554847
|
|
|
chr12
|
69731874
|
69732490
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108044007
|
|
|
chr12
|
69731923
|
69732303
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
21554848
|
|
|
chr12
|
69731923
|
69732303
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108044008
|
|
|
chr12
|
69731925
|
69732365
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
21554849
|
|
|
chr12
|
69731925
|
69732365
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108044009
|
|
|
chr12
|
69731934
|
69732319
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108044010
|
|
|
chr12
|
69731968
|
69732719
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108044011
|
|
|
chr12
|
69731970
|
69732306
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
21554850
|
|
|
chr12
|
69731970
|
69732306
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108044012
|
|
|
chr12
|
69731994
|
69732284
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
21554851
|
|
|
chr12
|
69731994
|
69732284
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108044013
|
|
|
chr12
|
69732003
|
69732634
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108044014
|
|
|
chr12
|
69732020
|
69732280
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
21554852
|
|
|
chr12
|
69732020
|
69732280
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108044015
|
|
|
chr12
|
69732035
|
69732217
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
21554853
|
|
|
chr12
|
69732035
|
69732217
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108044016
|
|
|
chr12
|
69732060
|
69732201
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
21554854
|
|
|
chr12
|
69732060
|
69732201
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108044017
|
|
|
chr12
|
69732081
|
69732269
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
21554855
|
|
|
chr12
|
69732081
|
69732269
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108044018
|
|
|
chr12
|
69732081
|
69732604
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108044019
|
|
|
chr12
|
69732087
|
69732471
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108044020
|
|
|
chr12
|
69732099
|
69732114
|
HNF4G
|
JASPAR
|
yes
|
|
82431127
|
|
|
chr12
|
69732099
|
69732114
|
HNF4G
|
JASPAR
|
yes
|
|
121715876
|
|
|
chr12
|
69732103
|
69732109
|
LEF1
|
TRANSFAC
|
yes
|
|
82431128
|
|
|
chr12
|
69732103
|
69732109
|
SOX10
|
JASPAR
|
yes
|
|
82431129
|
|
|
chr12
|
69732103
|
69732109
|
LEF1
|
TRANSFAC
|
yes
|
|
121715877
|
|
|
chr12
|
69732103
|
69732109
|
SOX10
|
JASPAR
|
yes
|
|
121715878
|
|
Genes associated with rs4761234[chr12:69732105], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr12
|
69742121
|
69748014
|
+
|
LYZ
|
ENSG00000090382.2
|
69742121
|
10016
|
Esophagus
|
5.25837e-06
|
12320
|
|
|
chr12
|
69742121
|
69748014
|
+
|
LYZ
|
ENSG00000090382.2
|
69742121
|
10016
|
Breast
|
5.79863e-10
|
12320
|
|
|
chr12
|
69742121
|
69748014
|
+
|
LYZ
|
ENSG00000090382.2
|
69742121
|
10016
|
Lung
|
9.00148e-38
|
12320
|
|
|
chr12
|
69742121
|
69748014
|
+
|
LYZ
|
ENSG00000090382.2
|
69742121
|
10016
|
Stomach
|
0.00102441
|
12320
|
|
|
chr12
|
69742121
|
69748014
|
+
|
LYZ
|
ENSG00000090382.2
|
69742121
|
10016
|
Adrenal
|
2.76831e-08
|
12320
|
|