EnhancerDB
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  3. rs477580[chr1:229171276]
Enhancers that have rs477580[chr1:229171276]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229146625 229173535 enh12758
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Liver Blood (T-cell) Blood (OCI-LY7) Placenta Breast Thyroid Pancreas Muscle (Myotube) Thymus Stomach
Transcript factors that have rs477580[chr1:229171276]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229171272 229171276 H1TF2 TRANSFAC yes 35955453
chr1 229171272 229171276 NFE TRANSFAC yes 35955454
chr1 229171272 229171276 SRF TRANSFAC yes 35955455
Genes associated with rs477580[chr1:229171276], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More