EnhancerDB
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  3. rs4788861[chr17:73072035]
Enhancers that have rs4788861[chr17:73072035]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 73060005 73078443 enh17373
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus Thymus
Transcript factors that have rs4788861[chr17:73072035]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 73070763 73072077 ZNF274 GTRD no Liver (HepG2) 21786931
chr17 73071183 73072103 TEF1 GTRD no Bone (Osteoblast) 21786933
chr17 73071185 73072211 ZNF274 GTRD no Liver (HepG2) 21786934
chr17 73071205 73072036 ZNF274 GTRD no Liver (HepG2) 21786935
chr17 73071287 73072120 ZNF274 GTRD no Liver (HepG2) 21786937
chr17 73071297 73072064 ZNF274 GTRD no Liver (HepG2) 21786938
chr17 73071313 73072158 ZNF274 GTRD no Liver (HepG2) 21786939
chr17 73071356 73072126 ZNF274 GTRD no Liver (HepG2) 21786943
chr17 73071372 73072198 ZNF274 GTRD no Liver (HepG2) 21786945
chr17 73072014 73072035 IRF1 JASPAR yes 55930996
chr17 73072018 73072039 IRF1 JASPAR yes 55930999
Genes associated with rs4788861[chr17:73072035], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 72606026 72619897 - CD300E ENSG00000186407.4 72619897 452138 Spleen 0.322032 16221