EnhancerDB
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  3. rs4846632[chr1:220542567]
Enhancers that have rs4846632[chr1:220542567]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220534493 220550315 enh12681
Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Brain (SK-N-SH) Bone (Osteoblast) Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs4846632[chr1:220542567]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220542559 220542572 SMAD2 JASPAR yes 35489161
chr1 220542562 220542573 TBX2 JASPAR yes 35489162
chr1 220542564 220542572 TBX15 JASPAR yes 35489163
chr1 220542564 220542572 TBX1 JASPAR yes 35489164
chr1 220542564 220542572 TBX4 JASPAR yes 35489165
chr1 220542564 220542572 TBX5 JASPAR yes 35489166
chr1 220542564 220542576 PKNOX1 JASPAR yes 35489167
chr1 220542564 220542576 TGIF1 JASPAR yes 35489168
chr1 220542564 220542576 TGIF2 JASPAR yes 35489169
chr1 220542564 220542579 SCRT1 JASPAR yes 35489170
chr1 220542565 220542575 ID4 JASPAR yes 35489171
chr1 220542565 220542575 MSC JASPAR yes 35489172
chr1 220542565 220542575 TCF3 JASPAR yes 35489173
chr1 220542566 220542575 SNAI2 JASPAR yes 35489174
chr1 220542566 220542579 SCRT2 JASPAR yes 35489175
chr1 220542567 220542572 USF2 TRANSFAC yes 35489176
Genes associated with rs4846632[chr1:220542567], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More