EnhancerDB
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Enhancers that have rs485000[chr1:115975393]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 115966905 115976995 enh27090
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung (A549) Colon (HCT116) Thyroid Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs485000[chr1:115975393]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 115975325 115978487 ZNF274 GTRD no Cervix (HeLa-S3) 21331077
chr1 115975346 115977990 ZNF143 GTRD no Epithelial (MCF-7) 21331078
chr1 115975358 115978286 ZNF274 GTRD no Cervix (HeLa-S3) 21331079
chr1 115975367 115978667 ZNF143 GTRD no Epithelial (MCF-7) 21331080
chr1 115975374 115977658 ZNF143 GTRD no Epithelial (MCF-7) 21331081
chr1 115975383 115975398 TFAP2A JASPAR yes 31735951
chr1 115975385 115975400 TFAP2C JASPAR yes 31735952
chr1 115975386 115975397 TFAP2A JASPAR yes 31735953
chr1 115975386 115975397 TFAP2B JASPAR yes 31735954
chr1 115975386 115975397 TFAP2C JASPAR yes 31735955
Genes associated with rs485000[chr1:115975393], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More