EnhancerDB
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  3. rs4915444[chr1:200454340]
Enhancers that have rs4915444[chr1:200454340]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200450387 200461835 enh12512
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Placenta Lung (PC-9) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs4915444[chr1:200454340]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200452697 200455179 ZNF274 GTRD no Cervix (HeLa-S3) 21363654
chr1 200453314 200454406 ZNF274 GTRD no Cervix (HeLa-S3) 21363664
chr1 200453796 200454504 ZNF143 GTRD no Epithelial (MCF-7) 21363669
chr1 200454339 200454350 HOXC13 JASPAR yes 34454089
chr1 200454340 200454350 HOXA13 JASPAR yes 34454090
chr1 200454340 200454350 HOXB13 JASPAR yes 34454091
chr1 200454340 200454350 HOXD13 JASPAR yes 34454092
Genes associated with rs4915444[chr1:200454340], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More