EnhancerDB
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  3. rs494030[chr1:53102527]
Enhancers that have rs494030[chr1:53102527]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 53096725 53105375 enh362
Esophagus Thymus Peripheral Blood (MM.1S) Blood (Karpas-422) Blood (T-cell) Stomach
chr1 53102510 53103405 vista1601
VISTA
Transcript factors that have rs494030[chr1:53102527]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 53100016 53102859 ZNF143 GTRD no Epithelial (MCF-7) 107803707
chr1 53100016 53102859 ZNF143 GTRD no Epithelial (MCF-7) 107803708
chr1 53100016 53102859 ZNF143 GTRD no Epithelial (MCF-7) 107803709
chr1 53101770 53102930 ZNF274 GTRD no Bone Marrow (K562) 107803721
chr1 53101770 53102930 ZNF274 GTRD no Bone Marrow (K562) 107803722
chr1 53101986 53102917 TCF7L2 GTRD no Colon (HCT116) 107803723
chr1 53101986 53102917 TCF7L2 GTRD no Colon (HCT116) 107803724
chr1 53102437 53102753 EBF1 UCSC Txn Factor no Conserved 107803726
chr1 53102437 53102753 EBF1 UCSC Txn Factor no Conserved 107803727
chr1 53102449 53102948 ZNF274 GTRD no Liver (HepG2) 107803728
chr1 53102449 53102948 ZNF274 GTRD no Liver (HepG2) 107803729
chr1 53102468 53103655 TCF7L2 GTRD no Colon (HCT116) 107803730
chr1 53102468 53103655 TCF7L2 GTRD no Colon (HCT116) 107803731
chr1 53102496 53102733 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107803732
chr1 53102520 53103042 ZNF274 GTRD no Liver (HepG2) 107803733
Genes associated with rs494030[chr1:53102527], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More