EnhancerDB
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  3. rs494163[chr1:52618023]
Enhancers that have rs494163[chr1:52618023]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52617722 52627505 enh58090
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs494163[chr1:52618023]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52618011 52618023 HNF1B JASPAR yes 28886489
chr1 52618013 52618023 EMX1 JASPAR yes 28886490
chr1 52618013 52618023 EMX2 JASPAR yes 28886491
chr1 52618013 52618023 GBX2 JASPAR yes 28886492
chr1 52618013 52618023 GSX1 JASPAR yes 28886493
chr1 52618013 52618023 GSX2 JASPAR yes 28886494
chr1 52618013 52618023 HOXB2 JASPAR yes 28886495
chr1 52618013 52618023 HOXB3 JASPAR yes 28886496
chr1 52618013 52618023 LHX6 JASPAR yes 28886497
chr1 52618013 52618023 MEOX1 JASPAR yes 28886498
chr1 52618013 52618023 MEOX2 JASPAR yes 28886499
chr1 52618013 52618023 MNX1 JASPAR yes 28886500
chr1 52618013 52618023 POU6F1 JASPAR yes 28886501
chr1 52618013 52618023 RAX JASPAR yes 28886502
chr1 52618013 52618024 HOXA10 JASPAR yes 28886503
Genes associated with rs494163[chr1:52618023], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More