EnhancerDB
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Enhancers that have rs4951236[chr1:205504159]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205502445 205516735 enh12593
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Astrocyte Lung Stomach Placenta Lung (PC-9) Pancreas Heart
Transcript factors that have rs4951236[chr1:205504159]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205502585 205505617 ZNF143 GTRD no Epithelial (MCF-7) 21372014
chr1 205503122 205505643 ZNF143 GTRD no Epithelial (MCF-7) 21372015
chr1 205503307 205506463 ZNF143 GTRD no Epithelial (MCF-7) 21372016
chr1 205503398 205505461 ZNF143 GTRD no Epithelial (MCF-7) 21372017
chr1 205503408 205506432 ZNF143 GTRD no Epithelial (MCF-7) 21372018
chr1 205503765 205506045 ZNF143 GTRD no Epithelial (MCF-7) 21372019
chr1 205503792 205506453 ZNF274 GTRD no Cervix (HeLa-S3) 21372020
chr1 205503855 205505568 ZNF143 GTRD no Epithelial (MCF-7) 21372021
chr1 205503881 205507307 ZNF274 GTRD no Cervix (HeLa-S3) 21372022
chr1 205503991 205506056 ZNF143 GTRD no Epithelial (MCF-7) 21372023
chr1 205504005 205506720 ZNF143 GTRD no Epithelial (MCF-7) 21372024
chr1 205504051 205505418 ZNF143 GTRD no Epithelial (MCF-7) 21372025
chr1 205504071 205506567 ZNF143 GTRD no Epithelial (MCF-7) 21372026
chr1 205504077 205506404 ZNF274 GTRD no Cervix (HeLa-S3) 21372027
chr1 205504091 205507176 ZNF143 GTRD no Epithelial (MCF-7) 21372028
chr1 205504094 205506044 ZNF143 GTRD no Epithelial (MCF-7) 21372029
chr1 205504094 205506553 ZNF143 GTRD no Epithelial (MCF-7) 21372030
chr1 205504129 205506204 ZNF143 GTRD no Epithelial (MCF-7) 21372031
chr1 205504144 205505301 ZNF143 GTRD no Epithelial (MCF-7) 21372032
chr1 205504146 205504163 RARA JASPAR yes 34767993
chr1 205504146 205504163 RXRA JASPAR yes 34767994
chr1 205504146 205505241 ZNF274 GTRD no Cervix (HeLa-S3) 21372033
chr1 205504151 205504163 PKNOX2 JASPAR yes 34767996
chr1 205504155 205504168 SMAD2 JASPAR yes 34767997
Genes associated with rs4951236[chr1:205504159], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More