EnhancerDB
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Enhancers that have rs4970580[chr1:38728382]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 38725245 38739635 enh66896
Bone Marrow (K562) Neural Stem Cells (H9) Embryonic Stem Cell Line (H1-hESC)
chr1 38728185 38732516 vista31
VISTA
Transcript factors that have rs4970580[chr1:38728382]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 38727179 38728804 FLI1 GTRD no Muscle (A673) 107686501
chr1 38728365 38728386 IRF1 JASPAR yes 28208229
chr1 38728365 38728386 IRF1 JASPAR yes 71126590
chr1 38728366 38728387 IRF1 JASPAR yes 28208230
chr1 38728366 38728387 IRF1 JASPAR yes 71126591
chr1 38728367 38728388 IRF1 JASPAR yes 28208231
chr1 38728367 38728388 IRF1 JASPAR yes 71126592
chr1 38728369 38728384 FOXP1 JASPAR yes 28208232
chr1 38728369 38728384 FOXP1 JASPAR yes 71126593
chr1 38728370 38728385 FOXP1 JASPAR yes 28208233
chr1 38728370 38728385 FOXP1 JASPAR yes 71126594
chr1 38728371 38728386 FOXP1 JASPAR yes 28208234
chr1 38728371 38728386 FOXP1 JASPAR yes 71126595
chr1 38728372 38728387 FOXP1 JASPAR yes 28208235
chr1 38728372 38728387 FOXP1 JASPAR yes 71126596
chr1 38728373 38728388 FOXP1 JASPAR yes 28208236
chr1 38728373 38728388 FOXP1 JASPAR yes 71126597
chr1 38728374 38728389 FOXP1 JASPAR yes 28208237
chr1 38728374 38728389 FOXP1 JASPAR yes 71126598
chr1 38728375 38728390 FOXP1 JASPAR yes 28208238
chr1 38728375 38728390 FOXP1 JASPAR yes 71126599
chr1 38728378 38728393 MEF2C JASPAR yes 28208239
chr1 38728378 38728393 MEF2C JASPAR yes 71126600
Genes associated with rs4970580[chr1:38728382], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More