EnhancerDB
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  3. rs5010868[chr1:204550366]
Enhancers that have rs5010868[chr1:204550366]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204527225 204550956 enh888
Bone Marrow (K562) Prostate (PC-3) Large Intestine Blood (T-cell) Esophagus Lung (PC-9) Blood (OCI-LY7) Lung (A549) Blood (GM12878) Muscle (A673) Thyroid Peripheral Blood (MM.1S) Stomach Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Thymus Epithelial (MCF-7)
Transcript factors that have rs5010868[chr1:204550366]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204550016 204551677 ZNF143 GTRD no Epithelial (MCF-7) 21370784
chr1 204550016 204551677 ZNF143 GTRD no Epithelial (MCF-7) 21370785
chr1 204550355 204550366 FOXB1 JASPAR yes 34712563
chr1 204550356 204550367 FOXB1 JASPAR yes 34712565
chr1 204550357 204550368 FOXB1 JASPAR yes 34712566
chr1 204550358 204550366 FOXL1 JASPAR yes 34712567
chr1 204550358 204550369 FOXB1 JASPAR yes 34712568
chr1 204550360 204550368 FOXL1 JASPAR yes 34712569
chr1 204550362 204550377 FOXA1 JASPAR yes 34712570
chr1 204550363 204550375 FOXI1 JASPAR yes 34712571
chr1 204550364 204550376 FOXC2 JASPAR yes 34712572
chr1 204550364 204550378 ONECUT3 JASPAR yes 34712573
chr1 204550365 204550376 FOXB1 JASPAR yes 34712574
chr1 204550365 204550376 FOXC1 JASPAR yes 34712575
chr1 204550365 204550381 POU4F2 JASPAR yes 34712576
chr1 204550365 204550381 POU4F3 JASPAR yes 34712577
chr1 204550366 204550370 YY1 TRANSFAC yes 34712578
chr1 204550366 204550381 FOXA1 JASPAR yes 34712579
Genes associated with rs5010868[chr1:204550366], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More