EnhancerDB
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  3. rs5028653[chr1:110072135]
Enhancers that have rs5028653[chr1:110072135]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 110070963 110077287 enh27062
Bone Marrow (K562) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Ovary Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Pancreas (Panc1) Muscle (Myotube) Thymus Heart
Transcript factors that have rs5028653[chr1:110072135]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 110072116 110072136 RREB1 JASPAR yes 31427467
chr1 110072119 110072139 RREB1 JASPAR yes 31427468
chr1 110072122 110072142 RREB1 JASPAR yes 31427469
chr1 110072126 110072146 RREB1 JASPAR yes 31427470
chr1 110072128 110072148 RREB1 JASPAR yes 31427471
chr1 110072129 110072144 RUNX2 JASPAR yes 31427472
chr1 110072130 110072139 RUNX2 JASPAR yes 31427473
chr1 110072130 110072140 RUNX3 JASPAR yes 31427474
chr1 110072131 110072151 RREB1 JASPAR yes 31427475
chr1 110072133 110072153 RREB1 JASPAR yes 31427476
Genes associated with rs5028653[chr1:110072135], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More