-
Home
- SNP
- rs519989[chr1:90223400]
Enhancers that have rs519989[chr1:90223400]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
90223174 |
90223447 |
vista2399 |
|
|
Transcript factors that have rs519989[chr1:90223400]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
90223129
|
90223493
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107813741
|
|
|
chr1
|
90223165
|
90223475
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
107813742
|
|
|
chr1
|
90223182
|
90223458
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107813743
|
|
|
chr1
|
90223183
|
90223479
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107813744
|
|
|
chr1
|
90223210
|
90223534
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
107813745
|
|
|
chr1
|
90223263
|
90223780
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107813746
|
|
|
chr1
|
90223311
|
90223580
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107813747
|
|
|
chr1
|
90223390
|
90223411
|
IRF1
|
JASPAR
|
yes
|
|
118325990
|
|
|
chr1
|
90223396
|
90223417
|
IRF1
|
JASPAR
|
yes
|
|
118325992
|
|
|
chr1
|
90223399
|
90223409
|
GABPA
|
JASPAR
|
yes
|
|
118325993
|
|
|
chr1
|
90223399
|
90223412
|
ELF1
|
JASPAR
|
yes
|
|
118325994
|
|
|
chr1
|
90223399
|
90223413
|
SPIC
|
JASPAR
|
yes
|
|
118325995
|
|
Genes associated with rs519989[chr1:90223400], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |