EnhancerDB
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  3. rs520984[chr1:116001965]
Enhancers that have rs520984[chr1:116001965]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 115988365 116003655 enh43031
Prostate (PC-3) Ovary Prostate (RWPE1) Lung (PC-9) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs520984[chr1:116001965]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116001488 116002797 ZNF143 GTRD no Epithelial (MCF-7) 21331155
chr1 116001798 116003036 ZNF143 GTRD no Epithelial (MCF-7) 21331156
chr1 116001804 116002790 ZNF143 GTRD no Epithelial (MCF-7) 21331157
chr1 116001815 116003891 ZNF143 GTRD no Epithelial (MCF-7) 21331158
chr1 116001817 116002763 ZNF143 GTRD no Epithelial (MCF-7) 21331159
chr1 116001889 116002665 ZNF143 GTRD no Epithelial (MCF-7) 21331160
chr1 116001917 116003032 ZNF143 GTRD no Epithelial (MCF-7) 21331161
chr1 116001927 116002689 ZNF143 GTRD no Epithelial (MCF-7) 21331162
chr1 116001928 116003034 ZNF143 GTRD no Epithelial (MCF-7) 21331163
chr1 116001946 116002531 ZNF143 GTRD no Epithelial (MCF-7) 21331164
chr1 116001959 116001969 NFKB1 JASPAR yes 31739297
chr1 116001961 116001975 ZIC1 JASPAR yes 31739298
chr1 116001961 116001976 ZIC3 JASPAR yes 31739299
chr1 116001961 116001976 ZIC4 JASPAR yes 31739300
Genes associated with rs520984[chr1:116001965], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More