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- rs527435340[chr17:12549507]
Enhancers that have rs527435340[chr17:12549507]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
12545245 |
12550160 |
enh52423 |
|
|
Transcript factors that have rs527435340[chr17:12549507]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
12549408
|
12549829
|
SOX2
|
GTRD
|
no
|
Neural Stem Cells (H9)
|
21743158
|
|
|
chr17
|
12549420
|
12549847
|
SOX2
|
GTRD
|
no
|
Neural Stem Cells (H9)
|
21743159
|
|
|
chr17
|
12549425
|
12549748
|
SOX2
|
GTRD
|
no
|
Neural Stem Cells (H9)
|
21743160
|
|
|
chr17
|
12549495
|
12549509
|
ONECUT1
|
JASPAR
|
yes
|
|
53180345
|
|
|
chr17
|
12549499
|
12549514
|
RUNX2
|
JASPAR
|
yes
|
|
53180346
|
|
|
chr17
|
12549503
|
12549513
|
RUNX3
|
JASPAR
|
yes
|
|
53180347
|
|
|
chr17
|
12549503
|
12549836
|
SOX2
|
GTRD
|
no
|
Neural Stem Cells (H9)
|
21743161
|
|
Genes associated with rs527435340[chr17:12549507], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |