EnhancerDB
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  3. rs528572283[chr17:77888344]
Enhancers that have rs528572283[chr17:77888344]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 77874365 77906030 enh17425
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Brain (SK-N-MC) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Breast Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Thymus Heart
Transcript factors that have rs528572283[chr17:77888344]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 77886653 77888804 ZNF143 GTRD no Epithelial (MCF-7) 21796520
chr17 77886974 77888463 ZNF143 GTRD no Epithelial (MCF-7) 21796523
chr17 77886988 77888693 ZNF143 GTRD no Epithelial (MCF-7) 21796524
chr17 77887105 77888711 ZNF143 GTRD no Epithelial (MCF-7) 21796525
chr17 77887158 77888614 ZNF143 GTRD no Epithelial (MCF-7) 21796526
chr17 77887203 77888689 ZNF143 GTRD no Epithelial (MCF-7) 21796528
chr17 77887323 77888411 ZNF143 GTRD no Epithelial (MCF-7) 21796535
chr17 77887356 77888422 TCF7L2 GTRD no Colon (HCT116) 21796538
chr17 77887464 77888490 ZNF143 GTRD no Epithelial (MCF-7) 21796543
chr17 77887491 77888366 TCF7L2 GTRD no Colon (HCT116) 21796546
chr17 77887525 77888430 TCF7L2 GTRD no Colon (HCT116) 21796550
chr17 77887732 77888429 ZNF274 GTRD no Blood (GM12878) 21796561
chr17 77887856 77888393 ZNF274 GTRD no Blood (GM12878) 21796565
chr17 77887903 77888509 ZNF143 GTRD no Epithelial (MCF-7) 21796566
chr17 77888169 77888611 ZNF143 GTRD no Epithelial (MCF-7) 21796570
chr17 77888221 77888650 ZNF143 GTRD no Epithelial (MCF-7) 21796571
chr17 77888337 77888358 REST JASPAR yes 56228094
chr17 77888338 77888357 REST JASPAR yes 56228095
chr17 77888341 77888352 EBF1 JASPAR yes 56228096
Genes associated with rs528572283[chr17:77888344], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More