EnhancerDB
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Enhancers that have rs528860560[chr17:2718143]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2712160 2721479 enh32057
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Colon (HCT116) Lung (PC-9) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
chr17 2717801 2718168 vista23732
VISTA
Transcript factors that have rs528860560[chr17:2718143]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2717863 2718616 P63 GTRD no Skin (Keratinocyte) 108231236
chr17 2717863 2718616 P63 GTRD no Skin (Keratinocyte) 108231237
chr17 2717884 2718204 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108231238
chr17 2717896 2718226 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108231239
chr17 2717914 2718174 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108231240
chr17 2717915 2718295 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108231241
chr17 2717919 2718199 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108231242
chr17 2717925 2718245 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108231243
chr17 2717927 2718843 P63 GTRD no Skin (Keratinocyte) 108231244
chr17 2717927 2718843 P63 GTRD no Skin (Keratinocyte) 108231245
chr17 2717928 2718228 RUNX3 UCSC Txn Factor no Conserved 108231246
chr17 2717928 2718228 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108231247
chr17 2717965 2718205 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108231248
chr17 2717967 2718182 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108231249
chr17 2717967 2718211 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21739708
chr17 2717967 2718211 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108231250
chr17 2717993 2718847 P63 GTRD no Skin (Keratinocyte) 108231251
chr17 2717993 2718847 P63 GTRD no Skin (Keratinocyte) 108231252
chr17 2718127 2718147 RREB1 JASPAR yes 21185511
chr17 2718127 2718147 RREB1 JASPAR yes 52774447
chr17 2718130 2718150 RREB1 JASPAR yes 21185513
chr17 2718130 2718150 RREB1 JASPAR yes 52774449
chr17 2718133 2718147 PLAG1 JASPAR yes 21185514
chr17 2718133 2718147 PLAG1 JASPAR yes 52774450
chr17 2718133 2718153 RREB1 JASPAR yes 21185515
chr17 2718133 2718153 RREB1 JASPAR yes 52774451
chr17 2718138 2718148 ZNF740 JASPAR yes 21185516
chr17 2718138 2718148 ZNF740 JASPAR yes 52774452
chr17 2718139 2718149 ZNF740 JASPAR yes 21185517
chr17 2718139 2718149 ZNF740 JASPAR yes 52774453
chr17 2718139 2718151 E2F8 JASPAR yes 21185518
chr17 2718139 2718151 E2F8 JASPAR yes 52774454
chr17 2718141 2718156 NR2C2 JASPAR yes 21185519
chr17 2718141 2718156 NR2C2 JASPAR yes 52774455
chr17 2718142 2718152 SP1 JASPAR yes 21185520
chr17 2718142 2718152 SP1 JASPAR yes 52774456
chr17 2718143 2718153 SP1 JASPAR yes 21185521
chr17 2718143 2718153 SP1 JASPAR yes 52774457
Genes associated with rs528860560[chr17:2718143], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More