EnhancerDB
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  3. rs528906674[chr1:117048854]
Enhancers that have rs528906674[chr1:117048854]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs528906674[chr1:117048854]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117048574 117049124 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21333307
chr1 117048724 117048988 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21333308
chr1 117048740 117049136 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333309
chr1 117048741 117049071 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21333310
chr1 117048823 117048968 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21333311
chr1 117048841 117049105 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21333312
chr1 117048850 117048855 SP1 TRANSFAC yes 31815213
chr1 117048852 117048863 EBF1 JASPAR yes 31815214
Genes associated with rs528906674[chr1:117048854], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More