EnhancerDB
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  3. rs528961885[chr1:172950327]
Enhancers that have rs528961885[chr1:172950327]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172934137 172951875 enh12379
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Thymus Stomach
Transcript factors that have rs528961885[chr1:172950327]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172950321 172950335 RORA JASPAR yes 33175068
chr1 172950322 172950333 PHOX2A JASPAR yes 33175069
chr1 172950324 172950334 POU6F2 JASPAR yes 33175070
chr1 172950325 172950335 EMX2 JASPAR yes 33175071
chr1 172950325 172950335 EVX1 JASPAR yes 33175072
chr1 172950325 172950335 EVX2 JASPAR yes 33175073
chr1 172950325 172950335 LHX2 JASPAR yes 33175074
chr1 172950325 172950335 MEOX1 JASPAR yes 33175075
chr1 172950325 172950335 NOTO JASPAR yes 33175076
chr1 172950326 172950334 LBX1 JASPAR yes 33175077
chr1 172950326 172950334 PDX1 JASPAR yes 33175078
chr1 172950326 172950334 VAX1 JASPAR yes 33175079
chr1 172950326 172950334 VAX2 JASPAR yes 33175080
chr1 172950326 172950334 VSX1 JASPAR yes 33175081
chr1 172950326 172950334 VSX2 JASPAR yes 33175082
Genes associated with rs528961885[chr1:172950327], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More