EnhancerDB
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  3. rs529293543[chr2:204673162]
Enhancers that have rs529293543[chr2:204673162]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 204660585 204687955 enh19133
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Thymus Stomach
chr2 204672850 204673169 vista34447
VISTA
Transcript factors that have rs529293543[chr2:204673162]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 204673152 204673164 NHLH1 JASPAR yes 22195527
chr2 204673152 204673164 NHLH1 JASPAR yes 80267791
chr2 204673153 204673162 SNAI2 JASPAR yes 22195528
chr2 204673153 204673162 SNAI2 JASPAR yes 80267792
chr2 204673153 204673163 ID4 JASPAR yes 22195529
chr2 204673153 204673163 NHLH1 JASPAR yes 22195530
chr2 204673153 204673163 TCF3 JASPAR yes 22195531
chr2 204673153 204673163 TCF4 JASPAR yes 22195532
chr2 204673153 204673163 ID4 JASPAR yes 80267793
chr2 204673153 204673163 NHLH1 JASPAR yes 80267794
chr2 204673153 204673163 TCF3 JASPAR yes 80267795
chr2 204673153 204673163 TCF4 JASPAR yes 80267796
chr2 204673159 204673174 LEF1 JASPAR yes 22195533
chr2 204673159 204673174 LEF1 JASPAR yes 80267797
chr2 204673160 204673174 TCF7L2 JASPAR yes 22195534
chr2 204673160 204673174 TCF7L2 JASPAR yes 80267798
Genes associated with rs529293543[chr2:204673162], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More