EnhancerDB
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  3. rs529470548[chr1:42143457]
Enhancers that have rs529470548[chr1:42143457]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42121525 42155124 enh11793
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs529470548[chr1:42143457]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42143445 42143460 ZIC4 JASPAR yes 28408971
chr1 42143446 42143460 ZIC1 JASPAR yes 28408972
chr1 42143452 42143457 SP1 TRANSFAC yes 28408973
chr1 42143456 42143460 ESR1 TRANSFAC yes 28408974
chr1 42143456 42143467 USF1 JASPAR yes 28408975
chr1 42143457 42143467 SREBF1 JASPAR yes 28408976
chr1 42143457 42143467 SREBF2 JASPAR yes 28408977
Genes associated with rs529470548[chr1:42143457], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More