EnhancerDB
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  3. rs529534974[chr17:77880408]
Enhancers that have rs529534974[chr17:77880408]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 77874365 77906030 enh17425
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Brain (SK-N-MC) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Breast Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Thymus Heart
Transcript factors that have rs529534974[chr17:77880408]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 77879048 77880783 TCF7L2 GTRD no Colon (HCT116) 21796363
chr17 77879952 77880468 ZNF143 GTRD no Epithelial (MCF-7) 21796402
chr17 77880042 77880469 ZNF143 GTRD no Epithelial (MCF-7) 21796403
chr17 77880045 77880551 ZNF143 GTRD no Epithelial (MCF-7) 21796404
chr17 77880050 77880522 ZNF143 GTRD no Epithelial (MCF-7) 21796405
chr17 77880273 77881778 TCF7L2 GTRD no Colon (HCT116) 21796406
chr17 77880276 77880949 ZNF143 GTRD no Epithelial (MCF-7) 21796407
chr17 77880320 77881408 TCF7L2 GTRD no Colon (HCT116) 21796408
chr17 77880396 77880416 RREB1 JASPAR yes 56226986
chr17 77880399 77880419 RREB1 JASPAR yes 56226987
chr17 77880402 77880422 RREB1 JASPAR yes 56226988
chr17 77880408 77880428 RREB1 JASPAR yes 56226989
Genes associated with rs529534974[chr17:77880408], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More