EnhancerDB
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  3. rs529660299[chr1:46431402]
Enhancers that have rs529660299[chr1:46431402]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 46429805 46450173 enh330
Liver (HepG2) Large Intestine Esophagus Stomach Colon (HCT116) Adrenal Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs529660299[chr1:46431402]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 46431396 46431412 POU4F3 JASPAR yes 28633062
chr1 46431398 46431409 HOXA10 JASPAR yes 28633063
chr1 46431398 46431413 HNF1A JASPAR yes 28633064
chr1 46431399 46431409 GSX2 JASPAR yes 28633065
chr1 46431399 46431409 HOXB2 JASPAR yes 28633066
chr1 46431399 46431409 HOXB3 JASPAR yes 28633067
chr1 46431399 46431409 MNX1 JASPAR yes 28633068
chr1 46431399 46431409 POU6F1 JASPAR yes 28633069
chr1 46431400 46431408 LMX1A JASPAR yes 28633070
chr1 46431400 46431408 LMX1B JASPAR yes 28633071
chr1 46431400 46431408 NKX6-1 JASPAR yes 28633072
chr1 46431400 46431408 NKX6-2 JASPAR yes 28633073
chr1 46431400 46431408 VAX1 JASPAR yes 28633074
chr1 46431400 46431408 VAX2 JASPAR yes 28633075
chr1 46431400 46431408 VSX1 JASPAR yes 28633076
chr1 46431400 46431408 VSX2 JASPAR yes 28633077
Genes associated with rs529660299[chr1:46431402], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More