EnhancerDB
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Enhancers that have rs529934332[chr1:116872238]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116846225 116879811 enh580
Bone Marrow (K562) Brain (SK-N-MC) Liver Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs529934332[chr1:116872238]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116871701 116872355 ZNF274 GTRD no Bone Marrow (K562) 21332176
chr1 116871707 116872396 ZNF274 GTRD no Bone Marrow (K562) 21332177
chr1 116871771 116872255 ZNF143 GTRD no Epithelial (MCF-7) 21332178
chr1 116871771 116872303 ZNF274 GTRD no Cervix (HeLa-S3) 21332179
chr1 116871797 116872327 ZNF274 GTRD no Bone Marrow (K562) 21332180
chr1 116872228 116872242 FOXF2 JASPAR yes 31795685
chr1 116872228 116872243 FOXP1 JASPAR yes 31795686
chr1 116872231 116872242 FOXP2 JASPAR yes 31795688
chr1 116872233 116872241 FOXG1 JASPAR yes 31795689
chr1 116872233 116872241 FOXO3 JASPAR yes 31795690
Genes associated with rs529934332[chr1:116872238], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More