EnhancerDB
  1. Home
  2. SNP
  3. rs529938338[chr1:90339954]
Enhancers that have rs529938338[chr1:90339954]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 90326658 90341655 enh483
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Blood (T-cell) Liver Astrocyte Lung (PC-9) Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Thymus Heart
Transcript factors that have rs529938338[chr1:90339954]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 90339944 90339954 RORA JASPAR yes 30628213
chr1 90339951 90339961 TBX21 JASPAR yes 30628214
chr1 90339951 90339962 TBX20 JASPAR yes 30628215
chr1 90339951 90339962 TBX2 JASPAR yes 30628216
chr1 90339951 90339964 EOMES JASPAR yes 30628217
chr1 90339952 90339960 MGA JASPAR yes 30628218
chr1 90339952 90339960 TBX15 JASPAR yes 30628219
chr1 90339952 90339960 TBX1 JASPAR yes 30628220
chr1 90339952 90339960 TBX4 JASPAR yes 30628221
chr1 90339952 90339960 TBX5 JASPAR yes 30628222
chr1 90339952 90339962 TBR1 JASPAR yes 30628223
Genes associated with rs529938338[chr1:90339954], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More