EnhancerDB
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  3. rs530306998[chr1:42227285]
Enhancers that have rs530306998[chr1:42227285]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs530306998[chr1:42227285]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42227274 42227286 POU2F1 JASPAR yes 28418972
chr1 42227274 42227287 POU3F3 JASPAR yes 28418973
chr1 42227275 42227287 POU3F1 JASPAR yes 28418974
chr1 42227275 42227287 POU3F2 JASPAR yes 28418975
chr1 42227276 42227285 POU3F4 JASPAR yes 28418976
chr1 42227276 42227285 POU5F1B JASPAR yes 28418977
chr1 42227279 42227291 DBP JASPAR yes 28418978
chr1 42227279 42227291 HLF JASPAR yes 28418979
chr1 42227279 42227291 TEF JASPAR yes 28418980
chr1 42227281 42227292 NFIL3 JASPAR yes 28418981
Genes associated with rs530306998[chr1:42227285], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More