EnhancerDB
  1. Home
  2. SNP
  3. rs530788277[chr1:25346213]
Enhancers that have rs530788277[chr1:25346213]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25342085 25355155 enh148
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Thymus Stomach
Transcript factors that have rs530788277[chr1:25346213]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25346192 25346213 REST JASPAR yes 27554281
chr1 25346192 25346213 REST JASPAR yes 118252517
chr1 25346207 25346218 GCM1 JASPAR yes 27554283
chr1 25346208 25346218 GCM2 JASPAR yes 27554284
Genes associated with rs530788277[chr1:25346213], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More