EnhancerDB
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  3. rs530834801[chr1:28404716]
Enhancers that have rs530834801[chr1:28404716]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28387565 28408035 enh180
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Heart
Transcript factors that have rs530834801[chr1:28404716]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28404709 28404718 VENTX JASPAR yes 27738262
chr1 28404711 28404721 HOXA13 JASPAR yes 27738263
chr1 28404711 28404721 HOXB13 JASPAR yes 27738264
chr1 28404711 28404721 HOXD13 JASPAR yes 27738265
chr1 28404712 28404716 YY1 TRANSFAC yes 27738266
Genes associated with rs530834801[chr1:28404716], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More