EnhancerDB
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  3. rs530868550[chr1:116923851]
Enhancers that have rs530868550[chr1:116923851]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116912865 116924675 enh582
Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs530868550[chr1:116923851]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116922655 116924036 P63 GTRD no Skin (Keratinocyte) 107824241
chr1 116923243 116924109 ZNF274 GTRD no Bone Marrow (K562) 107824245
chr1 116923317 116924132 ZNF274 GTRD no Bone Marrow (K562) 107824248
chr1 116923450 116923889 ZNF274 GTRD no Bone Marrow (K562) 107824252
chr1 116923840 116923855 HNF4A JASPAR yes 31802895
chr1 116923841 116923851 RORA JASPAR yes 31802896
chr1 116923841 116923856 HNF4G JASPAR yes 31802897
chr1 116923841 116923858 RARA JASPAR yes 31802898
chr1 116923845 116923851 LEF1 TRANSFAC yes 31802899
chr1 116923845 116923851 SOX10 JASPAR yes 31802900
chr1 116923845 116923860 FOXP1 JASPAR yes 31802901
Genes associated with rs530868550[chr1:116923851], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More